Publications 2006

University of Potsdam - Institute of Biochemistry and Biology- Bioinformatics group - Publications -2006

F. Cordes, R. Kaiser and J. Selbig (2006)
Bioinformatics approach to predicting HIV drug resistance.
Expert review of molecular diagnostics 6, 207–215.

S. Grell, T. Schaub and J. Selbig (2006)
Modelling Biological Networks by Action Languages Via Answer Set Programming.
4079In S. Etalle and M. Truszczynski (ed.): Lecture Notes in Computer Science,Springer Berlin / Heidelberg, 285–299.

M. Jacobsen, D. Repsilber, A. Gutschmidt, A. Neher, K. Feldmann, H.J. Mollenkopf, S.H.E. Kaufmann and A. Ziegler (2006)
Deconfounding microarray analysis - independent measurements of cell type proportions used in a regression model to resolve tissue heterogeneity bias.
Methods of information in medicine 45, 557–563.

H. Lindroos, O. Vinnere, A. Mira, D. Repsilber, K. Näslund and S.G.E. Andersson (2006)
Genome rearrangements, deletions, and amplifications in the natural population of Bartonella henselae.
Journal of bacteriology 188, 7426–7439.

M. Möhlig, A. Flöter, J. Spranger, M. Weickert, T. Schill, H. Schlösser, G. Brabant, A. Pfeiffer, J. Selbig and C. Schöfl (2006)
Predicting impaired glucose metabolism in women with polycystic ovary syndrome by decision tree modelling.
Diabetologia 49, 2572–2579.

K. Roomp, N. Beerenwinkel, T. Sing, E. Schülter, J. Büch, S. Sierra-Aragon, M. Däumer, D. Hoffmann, R. Kaiser, T. Lengauer and J. Selbig (2006)
Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV.
4075In U. Leser, F. Naumann and B. Eckman (ed.): Lecture Notes in Computer Science,Springer Berlin / Heidelberg, 185–194.

L. Snipen, D. Repsilber, L. Nyquist, A. Ziegler, Å. Aakra and A. Aastveit (2006)
Detection of divergent genes in microbial aCGH experiments.
BMC Bioinformatics 7, 181.

M. Steinfarth, D. Repsilber, M. Hische, N. Schauer, A.R. Fernie and J. Selbig (2006)
Metabolite profiles as a reflection of physiological status - a methodological validation..
Journal of Intergrative Bioinformatics 3, 2.

M. Steinfarth, M. Scholz and J. Selbig (2006)
Profile data analysis: missing value estimation, dimension reduction, clustering and classification.
European Training and Networking activity Plant Genomics and Bioinformatics, Expression Microarray and beyond- a course book, ISBN 3-00-018316-7.

R. Steuer, T. Gross, J. Selbig and B. Blasius (2006)
Structural kinetic modeling of metabolic networks.
Proceedings of the National Academy of Sciences 103, 11868–11873.

R. Steuer, P. Humburg and J. Selbig (2006)
Validation and functional annotation of expression-based clusters based on gene ontology.
BMC Bioinformatics 7, 380.