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Publications 2017

Alseekh S, Tong H, Scossa F, Brotman Y, Vigroux F, Tohge T, Ofner I, Zamir D, Nikoloski Z, Fernie AR.
Canalization of Tomato Fruit Metabolism.
Plant Cell. 2017 Nov;29(11):2753-2765.

Annunziata MG, Apelt F, Carillo P, Krause U, Feil R, Mengin V, Lauxmann MA, Köhl K, Nikoloski Z, Stitt M, Lunn JE, Raines C.
Getting back to nature: a reality check for experiments in controlled environments.
J Exp Bot. 2017 Jul 20;68(16):4463-4477.

Apelt F, Breuer D, Olas JJ, Annunziata MG, Flis A, Nikoloski Z, Kragler F, Stitt M.
Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement.
Plant Physiol. 2017 Jul;174(3):1949-1968.

Bents D, Rybak A, Groth D.
Spatial conscript body height correlation of Norwegian districts in the 19th century.
Anthropol Anz. 2017 Apr 1;74(1):65-69.

Breuer D, Nowak J, Ivakov A, Somssich M, Persson S, Nikoloski Z.
System-wide organization of actin cytoskeleton determines organelle transport in hypocotyl plant cells.
Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):E5741-E5749

de Abreu e Lima, F.; Westhues, M.; Cuadros-Inostroza, Á.; Willmitzer, L.; Melchinger, A. E.; Nikoloski, Z.
Metabolic robustness in young roots underpins a predictive model of maize hybrid performance in the field.
The Plant Journal, 2017  Apr;90(2):319-329.

Gago, J.; Fernie, A. R.; Nikoloski, Z.; Tohge, T.; Martorell, S.; Mariano Escalona, J.; Ribas-Carbo, M.; Flexas, J.; Medrano, H.
Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard.
Plant Methods 13:90 (2017)

Gisder S, Schüler V, Horchler LL, Groth D, Genersch E.
Long-Term Temporal Trends of Nosema spp. Infection Prevalence in Northeast Germany: Continuous Spread of Nosema ceranae, an Emerging Pathogen of Honey Bees (Apis mellifera), but No General Replacement of Nosema apis.
Front Cell Infect Microbiol. 2017 Jul 6.

Gomula A, Koziel S, Groth D, Bielicki T.
The effect of neighboring districts on body height of Polish conscripts.
Anthropol Anz. 2017 Apr 1;74(1):71-76.

Groth D.
Modeling a secular trend by Monte Carlo simulation of height biased migration in a spatial network.
Anthropol Anz. 2017 Apr 1;74(1):81-88.

Koziel S, Hermanussen M, Gomula A, Swanson J, Kaczmarek M, El-Shabrawi M, Elhusseini M, Satake T, Martinović IK, Scheffler C, Morkuniene R, Godina E, Saša M, Janina T, Anna S, Nieczuja-Dwojacka J, Núñez J, Groth D, Barbieri D.
Meeting Reports: Adolescence - a Transition to Adulthood Proceedings of the 24th Aschauer Soiree, held at Jurata, Poland, November 5th 2016.
Pediatr Endocrinol Rev. 2017 Mar;14(3):326-334.

Küken A, Nikoloski Z.
Genome-Scale Modeling of Photorespiratory Pathway Manipulation.
Methods Mol Biol. 2017;1653:195-202.

Mumm R, Czernitzki AF, Bents D, Musalek M.
Socioeconomic situation and growth in infants and juveniles.
Anthropol Anz. 2017 Jul 1;74(2):101-107.

Omranian N, Nikoloski Z.
Computational Approaches to Study Gene Regulatory Networks.
Methods Mol Biol. 2017;1629:283-295.

Robaina-Estévez, S.; Nikoloski, Z.
On the effects of alternative optima in context-specific metabolic model predictions.
PLoS Computational Biology May 30;13(5):e1005568 (2017)

Robaina-Estévez, S.; Daloso, D. M.; Zhang, Y.; Fernie, A. R.; Nikoloski, Z.
Resolving the central metabolism of Arabidopsis guard cells.
Scientific Reports 7, 8307 (2017)

Rodriguez Cubillos AE, Tong H, Alseekh S, de Abreu E Lima F, Yu J, Fernie AR, Nikoloski Z, Laitinen RAE.
Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat.
Heredity (Edinb). 2017 Dec 13.

Ruprecht, C.; Lohaus, R.; Vanneste, K.; Mutwil, M.; Nikoloski, Z.; Van de Peer, Y.; Persson, S.
Revisiting ancestral polyploidy in plants.
Science Advances 3 (7), e1603195 (2017)

Schwahn, K.; Beleggia, R.; Omranian, N.; Nikoloski, Z.:
Stoichiometric Correlation Analysis: Principles of Metabolic Functionality from Metabolomics Data.
Frontiers in Plant Science 8, 2152 (2017)

Swiadek, M.; Proost, S.; Sieh, D.; Yu, J.; Todesco, M.; Jorzig, C.; Cubillos, A.; Plötner, B.; Nikoloski, Z.; Chae, E. et al.:
Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana.
New Phytologist 213 (2), S. 900 - 915 (2017)

Westhues M, Schrag TA, Heuer C, Thaller G, Utz HF, Schipprack W, Thiemann A, Seifert F, Ehret A, Schlereth A, Stitt M, Nikoloski Z, Willmitzer L, Schön CC, Scholten S, Melchinger AE.
Omics-based hybrid prediction in maize.
Theor Appl Genet. 2017 Sep;130(9):1927-1939.

Wu S, Tohge T, Cuadros-Inostroza Á, Tong H, Tenenboim H, Kooke R, Méret M, Keurentjes JB, Nikoloski Z, Fernie AR, Willmitzer L, Brotman Y.
Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions.
Mol Plant. 2018 Jan 8;11(1):118-134.

Zhang Y, Beard KFM, Swart C, Bergmann S, Krahnert I, Nikoloski Z, Graf A, Ratcliffe RG, Sweetlove LJ, Fernie AR, Obata T.
Protein-protein interactions and metabolite channelling in the plant tricarboxylic acid cycle.
Nat Commun. 2017 May 16;8:15212.